{"id":795,"date":"2025-07-13T14:49:16","date_gmt":"2025-07-13T19:49:16","guid":{"rendered":"https:\/\/open.qtlmax.com\/guide\/?p=795"},"modified":"2025-07-13T14:53:51","modified_gmt":"2025-07-13T19:53:51","slug":"how-to-draw-a-scatter-plot-matrix","status":"publish","type":"post","link":"https:\/\/open.qtlmax.com\/guide\/index.php\/2025\/07\/13\/how-to-draw-a-scatter-plot-matrix\/","title":{"rendered":"How to draw a scatter plot matrix"},"content":{"rendered":"\n<p><strong>Figure 1<\/strong> shows QTLmax Workbench with the &#8220;Scatter Plot Matrix&#8221; tab selected.<\/p>\n\n\n\n<figure class=\"wp-block-image size-large\"><img decoding=\"async\" src=\"https:\/\/help.qtlmax.com\/kr\/data\/editor\/2401\/thumb-scatter_plot_1200x693.png\" alt=\"\"\/><\/figure>\n\n\n\n<p>(Figure 1)<\/p>\n\n\n\n<p>The &#8220;Scatter Plot Matrix&#8221; tab has many configuration options. If you don&#8217;t want to select each setting individually, simply click the <strong>[Load demo] button<\/strong>. You&#8217;ll see most of the settings are automatically configured (Figure 2). The input data format is a CSV (*.csv) file containing multiple phenotypic information. After replacing the demo data with your own, you can freely change the settings to your desired values.<\/p>\n\n\n\n<figure class=\"wp-block-image size-large\"><img decoding=\"async\" src=\"https:\/\/help.qtlmax.com\/kr\/data\/editor\/2401\/thumb-scatter_plot2_1200x693.png\" alt=\"\"\/><\/figure>\n\n\n\n<p>(Figure 2)<\/p>\n\n\n\n<p>You will see the header values of the data you entered displayed in the <strong>Columns<\/strong> box. From here, select the trait you want to compare for correlation one by one. Then, click the <strong>[->] button<\/strong> to add the trait&#8217;s name to the <strong>Factor table<\/strong>. Once you&#8217;ve selected all traits, choose each trait within the Factor table and click the <strong>[Palette] button<\/strong>. From the pop-up palette, select your desired color. Repeat this process to select colors for all the chosen traits.<\/p>\n\n\n\n<p>Navigate to the second tab named <strong>Workspace 2<\/strong>. Here, you can choose whether to display the <strong>Main title<\/strong>. If you check the box to display it, enter the desired Main title value. Once all your settings are complete, click the <strong>[Visualize] button<\/strong> and you&#8217;ll see the Scatter Plot Matrix appear in the plot area on the right (Figure 3).<\/p>\n\n\n\n<figure class=\"wp-block-image size-large\"><img decoding=\"async\" src=\"https:\/\/help.qtlmax.com\/kr\/data\/editor\/2401\/thumb-scatter_plot3_1200x693.png\" alt=\"\"\/><\/figure>\n\n\n\n<p>(Figure 3)<\/p>\n\n\n\n<p><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Figure 1 shows QTLmax Workbench with the &#8220;Scatter Plot Matrix&#8221; tab selected. (Figure 1) The &#8220;Scatter Plot Matrix&#8221; tab has many configuration options. If you don&#8217;t want to select each setting individually, simply click the [Load demo] button. You&#8217;ll see most of the settings are automatically configured (Figure 2). The input data format is a [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_bbp_topic_count":0,"_bbp_reply_count":0,"_bbp_total_topic_count":0,"_bbp_total_reply_count":0,"_bbp_voice_count":0,"_bbp_anonymous_reply_count":0,"_bbp_topic_count_hidden":0,"_bbp_reply_count_hidden":0,"_bbp_forum_subforum_count":0,"footnotes":""},"categories":[1],"tags":[],"class_list":["post-795","post","type-post","status-publish","format-standard","hentry","category-guide"],"_links":{"self":[{"href":"https:\/\/open.qtlmax.com\/guide\/index.php\/wp-json\/wp\/v2\/posts\/795","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/open.qtlmax.com\/guide\/index.php\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/open.qtlmax.com\/guide\/index.php\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/open.qtlmax.com\/guide\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/open.qtlmax.com\/guide\/index.php\/wp-json\/wp\/v2\/comments?post=795"}],"version-history":[{"count":3,"href":"https:\/\/open.qtlmax.com\/guide\/index.php\/wp-json\/wp\/v2\/posts\/795\/revisions"}],"predecessor-version":[{"id":800,"href":"https:\/\/open.qtlmax.com\/guide\/index.php\/wp-json\/wp\/v2\/posts\/795\/revisions\/800"}],"wp:attachment":[{"href":"https:\/\/open.qtlmax.com\/guide\/index.php\/wp-json\/wp\/v2\/media?parent=795"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/open.qtlmax.com\/guide\/index.php\/wp-json\/wp\/v2\/categories?post=795"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/open.qtlmax.com\/guide\/index.php\/wp-json\/wp\/v2\/tags?post=795"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}